CDS

Accession Number TCMCG016C15086
gbkey CDS
Protein Id OMO75793.1
Location complement(join(19665..19861,20017..20275,20378..21462,22126..22224,22318..22339))
Organism Corchorus capsularis
locus_tag CCACVL1_16036

Protein

Length 553aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010957.1
Definition hypothetical protein CCACVL1_16036 [Corchorus capsularis]
Locus_tag CCACVL1_16036

EGGNOG-MAPPER Annotation

COG_category P
Description Retinoblastoma-binding protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14961        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04934        [VIEW IN KEGG]
map04934        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034708        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0035064        [VIEW IN EMBL-EBI]
GO:0035097        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042393        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0043627        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044665        [VIEW IN EMBL-EBI]
GO:0044666        [VIEW IN EMBL-EBI]
GO:0048188        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051568        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071339        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:0140034        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGAATGCCCCAATCATCGATCCGCTGCAAGGAGATTTTCCTGAGGTAATAGAAGAATATTTGGAACATGGGGTTATGAAATGCATTGCCTTTAATCGCCGTGGCACCCTTCTCGCCGCTGGATGTTCTGATGGAAGTTGTGTTATCTGGGATTTTGAGACCCGGGGCATTGCCAAGGAGCTTAGAGATAGAGACTGTGCTGCTGCTATAACAAGTGTTTGCTGGTCAAAGCATGGGCATCGAATTCTTGTGTCCGCTGCTGACAAATCATTAACACTTTGGGATGTTGTTAGTGGTGAGAAGATTTCACGTGTTGTTCTGCAGCAAACCCCTTTACAATCTCGTCTACATCCCGGTTCTTCTATGCCATCTATATGCTTAGCTTGTCCTCTATCATCTGCTCCAACGATTGTTGACTTGAGTACTGGAAGTACAACCGTACTCCCAGTTACTGTTCCTAGTGATGGCAACGGCGTTGCTCCTCCTTCACGCAACAAATACCCTGATGGAACTCCTTACACACTAACTGCTGCATGCTTTAACAAGAATGGGGATCTGGTATATATGGGAAATTCCAAAGGTGAAATACTTATAATTGATCACAAAAATGTTAAAGTACTTGCTATGATTCCCATTTCTAGTGGTGCTGTGATCAAGAACATTGTCTTCAGCAGAAATGGGCAATATCTACTTACAAATTCAAATGATCGAATTATCAGGATTTATGAAAATCTTCTGCCACTGAAAGATGGACTTGGAGCCCTTGATAACCTCCACAAAACCATCGAAGAGGAAGATATTGTTGAGAAGATGAAAGCTGTTGGATCCAAATGCTTAGTTCTTTTTCGGGAGTTTCAAGATTTAATCACAAAGATGCACTGGAAAGCACCTTGTTTCAGTGGCGATGGTGAGTGGGTAATGGCCGCTTCTGCTAGCAAAGGAGAGCACAAGATCTACATATGGGACAGGGTTGGTCATCTTGTAAAAATGCTTGAAGGTCCAAAGGAAGCAGTGTTTGATTTAGCGTGGCATCCCGTCCACCCTATTATTGTGTCCGTTTCCTTGACTGGTTTGGTTTATATTTGGGCTAAAGACTACACTGAAAACTGGAGTGCATTTGCTCCAGATTTTAAAGAGCTTGAAGAAAATGAGGAGTATGTAGAAAGGGAAGATGAATTTGATCTGGTGCCTGAAACTGAAAAGGTGAAAGAGTCAGATGTGAATGAAGATGATGAAGTTGATATTGTGACGGTAGAGAAGGATCAATTCAGTGATTCAGATATGTCACAAGAAGAATTACGCTTTTTGCCAGCCATTCCTTGTCCTGATGTTCTTGAGCAGCAAGACAAGTGTGTGGGAAGTTCTTCAAAATTGATGGACAGTAATCAGTCTGGATCCCCTCTTTCGGAAGAGAATGAACAGAATGGACTTGCAGCCAATAATGCGTCAAGTCCACTTGAAGAGGACACTGGAGGAACACGGTTGAAAAGAAAAAGGAAACCTTCAGAGAAGGGATTGGAGTTACAAGCAGAGAAAGTCAGGAAGCCGTTAAAACCTGTAAAATCTTCTGGTAGGTCGTCAAAAACAAAAAGTAAATCTGTTGTTGATCAGGATTATGGCAATGGTGTATATGCGGATGATGGCTCTGATGATTACTAG
Protein:  
MMNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKELRDRDCAAAITSVCWSKHGHRILVSAADKSLTLWDVVSGEKISRVVLQQTPLQSRLHPGSSMPSICLACPLSSAPTIVDLSTGSTTVLPVTVPSDGNGVAPPSRNKYPDGTPYTLTAACFNKNGDLVYMGNSKGEILIIDHKNVKVLAMIPISSGAVIKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKDGLGALDNLHKTIEEEDIVEKMKAVGSKCLVLFREFQDLITKMHWKAPCFSGDGEWVMAASASKGEHKIYIWDRVGHLVKMLEGPKEAVFDLAWHPVHPIIVSVSLTGLVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLVPETEKVKESDVNEDDEVDIVTVEKDQFSDSDMSQEELRFLPAIPCPDVLEQQDKCVGSSSKLMDSNQSGSPLSEENEQNGLAANNASSPLEEDTGGTRLKRKRKPSEKGLELQAEKVRKPLKPVKSSGRSSKTKSKSVVDQDYGNGVYADDGSDDY